Trimming Trimmomatic Comparing the FastQC results before and af... | Filo

Overcoming NGS Bioinformatics Skills Gap with Actionable Roadmap | Lovekesh . posted on the topic | LinkedIn

FastQC provides critical metrics to assess the quality of your sequencing data before downstream analysis. Key modules include: 📉 𝐏𝐞𝐫 𝐛𝐚𝐬𝐞 𝐬𝐞𝐪𝐮𝐞𝐧𝐜𝐞 𝐪𝐮𝐚𝐥𝐢𝐭𝐲– Visualizes quality scores across each base position 📊𝐏𝐞𝐫 𝐬𝐞𝐪𝐮𝐞𝐧𝐜𝐞 𝐪𝐮𝐚𝐥𝐢𝐭𝐲 𝐬𝐜𝐨𝐫𝐞𝐬 – Shows overall quality distribution of reads 🧬 𝐏𝐞𝐫 𝐛𝐚𝐬𝐞 𝐬𝐞𝐪𝐮𝐞𝐧𝐜𝐞 𝐜𝐨𝐧𝐭𝐞𝐧𝐭– Detects imbalances in base composition across reads 🧪 𝐏𝐞𝐫 𝐛𝐚𝐬𝐞 𝐆𝐂 𝐜𝐨𝐧𝐭𝐞𝐧𝐭– Highlights deviations fr